{ "cells": [ { "cell_type": "code", "execution_count": 20, "metadata": {}, "outputs": [], "source": [ "import pandas as pd\n", "import singlecellmultiomics.countTableProcessing.downsampleDataFrame as ds" ] }, { "cell_type": "code", "execution_count": 14, "metadata": {}, "outputs": [ { "data": { "text/html": [ "
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cell_Acell_Bcell_Ccell_Dcell_Ecell_Fcell_Gcell_Hcell_Icell_J...cell_Qcell_Rcell_Scell_Tcell_Ucell_Vcell_Wcell_Xcell_Ycell_Z
A1421144204...2002041003
B4104432241...1424334344
C4240120444...1134314313
D4042122230...3320314400
E3324121322...0412433212
F2021024211...1211341140
G0433210043...4322224043
H2313140043...3403234323
I3223240111...0110130332
J4422144341...2244314121
K3402214410...3212114114
L4014422200...0431112314
M4340144422...2101140304
N0411212234...0421320122
O4140013423...1233202343
P3013034330...2312323414
Q0341041342...3030100330
R1401133022...0241332312
S4043224410...3121013331
T3131302221...2300110242
U2013043230...1234130343
V1134034403...0102434301
W4201043440...3244141241
X4110304130...3041300204
Y1144222123...2310001323
Z3021304421...2414440322
\n", "

26 rows × 26 columns

\n", "
" ], "text/plain": [ " cell_A cell_B cell_C cell_D cell_E cell_F cell_G cell_H cell_I \\\n", "A 1 4 2 1 1 4 4 2 0 \n", "B 4 1 0 4 4 3 2 2 4 \n", "C 4 2 4 0 1 2 0 4 4 \n", "D 4 0 4 2 1 2 2 2 3 \n", "E 3 3 2 4 1 2 1 3 2 \n", "F 2 0 2 1 0 2 4 2 1 \n", "G 0 4 3 3 2 1 0 0 4 \n", "H 2 3 1 3 1 4 0 0 4 \n", "I 3 2 2 3 2 4 0 1 1 \n", "J 4 4 2 2 1 4 4 3 4 \n", "K 3 4 0 2 2 1 4 4 1 \n", "L 4 0 1 4 4 2 2 2 0 \n", "M 4 3 4 0 1 4 4 4 2 \n", "N 0 4 1 1 2 1 2 2 3 \n", "O 4 1 4 0 0 1 3 4 2 \n", "P 3 0 1 3 0 3 4 3 3 \n", "Q 0 3 4 1 0 4 1 3 4 \n", "R 1 4 0 1 1 3 3 0 2 \n", "S 4 0 4 3 2 2 4 4 1 \n", "T 3 1 3 1 3 0 2 2 2 \n", "U 2 0 1 3 0 4 3 2 3 \n", "V 1 1 3 4 0 3 4 4 0 \n", "W 4 2 0 1 0 4 3 4 4 \n", "X 4 1 1 0 3 0 4 1 3 \n", "Y 1 1 4 4 2 2 2 1 2 \n", "Z 3 0 2 1 3 0 4 4 2 \n", "\n", " cell_J ... cell_Q cell_R cell_S cell_T cell_U cell_V cell_W \\\n", "A 4 ... 2 0 0 2 0 4 1 \n", "B 1 ... 1 4 2 4 3 3 4 \n", "C 4 ... 1 1 3 4 3 1 4 \n", "D 0 ... 3 3 2 0 3 1 4 \n", "E 2 ... 0 4 1 2 4 3 3 \n", "F 1 ... 1 2 1 1 3 4 1 \n", "G 3 ... 4 3 2 2 2 2 4 \n", "H 3 ... 3 4 0 3 2 3 4 \n", "I 1 ... 0 1 1 0 1 3 0 \n", "J 1 ... 2 2 4 4 3 1 4 \n", "K 0 ... 3 2 1 2 1 1 4 \n", "L 0 ... 0 4 3 1 1 1 2 \n", "M 2 ... 2 1 0 1 1 4 0 \n", "N 4 ... 0 4 2 1 3 2 0 \n", "O 3 ... 1 2 3 3 2 0 2 \n", "P 0 ... 2 3 1 2 3 2 3 \n", "Q 2 ... 3 0 3 0 1 0 0 \n", "R 2 ... 0 2 4 1 3 3 2 \n", "S 0 ... 3 1 2 1 0 1 3 \n", "T 1 ... 2 3 0 0 1 1 0 \n", "U 0 ... 1 2 3 4 1 3 0 \n", "V 3 ... 0 1 0 2 4 3 4 \n", "W 0 ... 3 2 4 4 1 4 1 \n", "X 0 ... 3 0 4 1 3 0 0 \n", "Y 3 ... 2 3 1 0 0 0 1 \n", "Z 1 ... 2 4 1 4 4 4 0 \n", "\n", " cell_X cell_Y cell_Z \n", "A 0 0 3 \n", "B 3 4 4 \n", "C 3 1 3 \n", "D 4 0 0 \n", "E 2 1 2 \n", "F 1 4 0 \n", "G 0 4 3 \n", "H 3 2 3 \n", "I 3 3 2 \n", "J 1 2 1 \n", "K 1 1 4 \n", "L 3 1 4 \n", "M 3 0 4 \n", "N 1 2 2 \n", "O 3 4 3 \n", "P 4 1 4 \n", "Q 3 3 0 \n", "R 3 1 2 \n", "S 3 3 1 \n", "T 2 4 2 \n", "U 3 4 3 \n", "V 3 0 1 \n", "W 2 4 1 \n", "X 2 0 4 \n", "Y 3 2 3 \n", "Z 3 2 2 \n", "\n", "[26 rows x 26 columns]" ] }, "execution_count": 14, "metadata": {}, "output_type": "execute_result" } ], "source": [ "import string\n", "import numpy as np\n", "# Generate random matrix:\n", "df = pd.DataFrame( { f'cell_{x}':{ y:np.random.randint(0,5) for y in string.ascii_uppercase } for x in string.ascii_uppercase})\n", "df" ] }, { "cell_type": "code", "execution_count": 27, "metadata": {}, "outputs": [ { "data": { "application/javascript": [ "/* Put everything inside the global mpl namespace */\n", "window.mpl = {};\n", "\n", "\n", "mpl.get_websocket_type = function() {\n", " if (typeof(WebSocket) !== 'undefined') {\n", " return WebSocket;\n", " } else if (typeof(MozWebSocket) !== 'undefined') {\n", " return MozWebSocket;\n", " } else {\n", " alert('Your browser does not have WebSocket support.' +\n", " 'Please try Chrome, Safari or Firefox ≥ 6. ' +\n", " 'Firefox 4 and 5 are also supported but you ' +\n", " 'have to enable WebSockets in about:config.');\n", " };\n", "}\n", "\n", "mpl.figure = function(figure_id, websocket, ondownload, parent_element) {\n", " this.id = figure_id;\n", "\n", " this.ws = websocket;\n", "\n", " this.supports_binary = (this.ws.binaryType != undefined);\n", "\n", " if (!this.supports_binary) {\n", " var warnings = document.getElementById(\"mpl-warnings\");\n", " if (warnings) {\n", " warnings.style.display = 'block';\n", " warnings.textContent = (\n", " \"This browser does not support binary websocket messages. \" +\n", " \"Performance may be slow.\");\n", " }\n", " }\n", "\n", " this.imageObj = new Image();\n", "\n", " this.context = undefined;\n", " this.message = undefined;\n", " this.canvas = undefined;\n", " this.rubberband_canvas = undefined;\n", " this.rubberband_context = undefined;\n", " this.format_dropdown = undefined;\n", "\n", " this.image_mode = 'full';\n", "\n", " this.root = $('
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');\n", " var titletext = $(\n", " '
');\n", " titlebar.append(titletext)\n", " this.root.append(titlebar);\n", " this.header = titletext[0];\n", "}\n", "\n", "\n", "\n", "mpl.figure.prototype._canvas_extra_style = function(canvas_div) {\n", "\n", "}\n", "\n", "\n", "mpl.figure.prototype._root_extra_style = function(canvas_div) {\n", "\n", "}\n", "\n", "mpl.figure.prototype._init_canvas = function() {\n", " var fig = this;\n", "\n", " var canvas_div = $('
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